Monthly Archives: March 2020

Correct coordinates in gtfToBed()

Aki Nakao pointed out a problem in gtfToBed(). In earlier versions the function did a basic reformatting without adjusting the coordinate system between gtf and bed (gtf is 1-based, bed however is 0-based). The function got now the option correctBases=TRUE … Continue reading

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New Version

A new version ( of the associated package GenomicTools.fileHandler was just submitted to Cran. It fixes a few smaller bugs in the file handling of the suite.

Posted in GenomicTools.fileHandler, Release | Leave a comment