Category Archives: Publication

importSTARLog() updated

I updated today the importSTARLog function so that it imports now both, the final.log and the log files. In addition, it can do that for all files within a folder and its subfolders. The next thing will be to write … Continue reading

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seqlength() function added

I added the seqlength() function to get the sequence length of a fa-object. This is in principle just a wrapper around the nchar() base-R command, but having an own function for this help then maybe later to write more sophisticated … Continue reading

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importFA() update

The function importFA() does not rely anymore on alternating rows between sequence and identifer, but can import now any kind of fasta file.

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New versions on Cran

Today the versions 0.2.8 for GenomicTools and 0.1.4 for GenomicTools.fileHandler have been released with a couple of bugfixes and a list of new features. In details we have * prereadGTF() function added * importGTF() function can now merge several gtfs … Continue reading

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Package manuscript published

The package description in ‘Computer Methods and Programs in Biomedicine’ was published here.  Until 23.10.2017 it can be downloaded here.

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